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Burton RA, Fincher GB (2014) Plant cell wall engineering: applications in biofuel production and improved human health. Current Opinions. Biotechnol, 26: 79-84.
Chowdhury J, Henderson M, Schweizer P, Burton RA, Fincher GB and Little A (2014) Differential accumulation of callose, arabinoxylans and cellulose in nonpenetrated versus penetrated papillae on leaves of barley infected with Blumeria graminis f. sp. Hordei, New Phytologist 204: 650-660. DOI: 10.1111/nph.12974
Comino P, Collins H, Lahnstein J, Beahan C, Gidley MJ (2014) Characterisation of soluble and insoluble cell wall fractions from rye, wheat and hull-less barley endosperm flours, Food Hydrocolloids, 41,219-226.
Coombe D, Davis C, Fincher G, McConville M, Packer N, Stubbs K, Williams S and Dell A (2013) Letter to the Glycoforum: Transforming glycoscience: An Australian perspective. Glycobiology, 24 (1): 1-3.
Dhital S, Butardo VM, Jobling SA, Gidley MJ. (2014). Rice starch granule amylolysis - differentiating effects of particle size, morphology, thermal properties and crystalline polymorph. Carbohydrate Polymers. dx.doi.org/10.1016/j.carbpol.2014.08.091.
Dhital S, Dolan G, Stokes JR, Gidley MJ (2014) Enzymatic hydrolysis of starch in the presence of cereal soluble fibre polysaccharides. Food and Function 5(3) 579-586.
Dhital S, Warren FJ, Gidley, Butterworth, PJ, Ellis PR, Gidley, MJ. (2014). Mechanisms of starch digestion by a-amylase–structural basis for kinetic properties, Critical Reviews in Food Science and Nutrition. DOI 10.1080/10408390.2014.922043.
Dhital S, Warren FJ, Zhang B, Gidley MJ. (2014). Amylase binding to starch granules under hydrolysing and non-hydrolysing conditions, Carbohydrate Polymers, 113, 97-107.
Doblin MS, Johnson K, Humphries J, Newbigin EJ, Bacic A (2014). Are designer plant cell walls a realistic aspiration or will the plasticity of the plants metabolism win out? Current Opinion in Biotech – Plant Biotech 26: 108-114
Foroughi S, Baker AJ, Roessner U, Johnson AA, Bacic A, & Callahan DL. (2014). Hyperaccumulation of zinc by Noccaea caerulescens results in a cascade of stress responses and changes in the elemental profile. Metallomics, 6(9), 1671-1682.
Gibbins HL, Yakubov GE, Proctor GB, Wilson, Stephen and Carpenter, Guy H. (2014) What interactions drive the salivary mucosal pellicle formation?. Colloids and Surfaces B: Biointerfaces, 120: 184-192.
Houston K, Russell J, Washington J, Burton RA, Fincher GB, and Waugh R (2014) A genome wide association scan for (1, 3; 1, 4)-ß-glucan content in the grain of contemporary 2-row Spring and Winter barleys. BMC Genomics, 15(1), 907.
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Lee, J. E., Lampugnani, E. R., Bacic, A. and Golz, J. F. (2014), SEUSS and SEUSS-LIKE 2 coordinate auxin distribution and KNOXI activity during embryogenesis. The Plant Journal. doi: 10.1111/tpj.12625
Li E, Dhital S, & Hasjim J. (2014). Effects of grain milling on starch structures and flour/starch properties. Starch-Stärke, 66(1-2), 15-27.
Li L, Huang J, Qin L, Huang Y, Zeng W, Rao Y, Li J, Li X, Xu WL (2014) Two cotton fiber-associated glycosyltransferases, GhGT43A1 and GhGT43C1, function in hemicellulose glucuronoxylan biosynthesis during plant development. Physiologia Plantarum DOI: 10.1111/ppl.12190
Li M, Lopato S, Hrmova M, Pickering M, Shirley N, Koltunow AM, Langridge P (2014) Expression patterns and protein structure of a lipid transfer protein END1 from Arabidopsis. Planta. DOI 240,1319-1334.
Liu W, Maurer HP, Li G, Tucker MR, Gowda M, Weissmann EA, Hahn V, Würschum T (2014) Genetic architecture of winter hardiness and frost tolerance in triticale. PLoS One 9(6):e99848. doi:10.1371/journal.pone.0099848.
Lopez-Sanchez P, Rincon Bonilla M, Wang D, Brulhart S, Stokes J, Gidley M. (2014) Micromechanics and poroelasticity of hydrated cellulose networks, Biomacromolecules 15, 2274−2284.
Lorbeer AJ, Lahnstein J, Fincher GB, Su P, Zhang W (2014) Kinetics of conventional and microwave-assisted fucoidan extractions from the brown alga, Ecklonia radiatea. Journal of Applied Phycology, DOI 10.1007/s10811-014-0446-8.
Lowe RGT, Cassin A, Grandaubert J, Clark BL, Van de Wouw AP, et al. (2014) Genomes and Transcriptomes of Partners in Plant-Fungal-Interactions between Canola (Brassica napus) and Two Leptosphaeria Species. PLoS ONE 9(7): e103098. doi:10.1371/journal.pone.0103098
Martin AP, Palmer W, Byrt CS, Furbank RT and Grof CPL (2013) A holistic high-throughput screening framework for biofuel feedstock assessment that characterises variations in soluble sugars and cell wall composition in Sorghum bicolor. Biotechnology for biofuels 6.1: 1-13. (DOI 10.1186/1754-6834-6-186).
Mikkelsen MD, Harholt J, Ulvskov P, Johansen IE, Fangel JU, Doblin MS, Bacic A, Willats WGT (2014). Evidence for land plant cell wall biosynthetic mechanisms in charophyte green algae Annals of Botany doi:10.1093/aob/mcu171.
Paulsen B S, Craik D J, Dunstan DE, Stone B A, Bacic A (2014). The Yariv reagent: behavior in different solvents and interaction with a gum arabic Arabinogalactan-protein. Carbohydrate Polymers. (DOI: 10.1016/j.carbpol.2014.01.009) 106 460-468.
Ratnayake S, Beahan CT, Callahan DL, Bacic A (2014) The reducing end sequence of wheat endosperm cell wall arabinoxylans. Carbohydrate Research 386, pp. 23-32 (DOI:10.1016/j.carres.2013.12.013).
Schreiber M, Wright F, MacKenzie K, Hedley PE, Schwerdt JG, Little A, Burton RA, Fincher GB, Marshall D, Waugh R, Halpin C. (2014). The barley genome sequence assembly reveals three additional members of the CslF (1, 3; 1, 4)-ß-Glucan Synthase Gene Family. PloS One, 9(3), e90888.
Selway N, Stokes JR (2014) 'Soft material deformation, flow, and lubrication between compliant substrates: Impact on flow, behavior, mouthfeel, stability, and flavor'. Annual Review of Food Science and Technology, Vol. 5, 373-393.
Trafford K and Fincher GB. (2014) Barley Grain Carbohydrates: Starch and Cell Walls. In: Barley Chemistry and Technology, 2nd Edition, PR Shewry and S Ullrich (editors), AACC Monograph Series, pp 71-95.
Tucker MR & Koltunow AM (2014). Traffic monitors at the cell periphery: the role of cell walls during early female reproductive cell differentiation in plants. Current Opinion in Plant Biology, 17, 137-145.
Warren FJ, Waltzer G, Zhang B, Gidley MJ, Dhital S (2014). The interplay of alpha-amylase and amyloglucosidase activities on the digestion of starch in in vitro enzymic systems. Carbohydrate Polymers, dx.doi.org/10.1016/j.carbpol.2014.09.043.
Yakubov GE, Macakova L, Wilson S, Windust JHC, Stokes JR (2014) Aqueous lubrication by fractionated salivary proteins: Synergistic interaction of mucin polymer brush with low molecular weight macromolecules, Tribology International, DOI: 10.1016/j.triboint.2014.12.025
Yakubov, G E (2014). Lubrication. In Antoon J. M. Ligtenberg and Enno C. I. Veerman (Ed.), Saliva: secretion and functions (pp. 71-87) Basel, Switzerland: S. Karger.
Yakubov, GE, Gibbins, H, Proctor, GB and Carpenter, Guy H (2014). Oral mucosa: physiological and physicochemical aspects. In Vitaliy V.
Yakubov, GE., Singleton, Scott and Williamson, A (2014). Methods for assessing mucoadhesion: the experience of an integrative approach.
Zhang Q, Cheetamun R, Dhugga KS, Rafalski JA, Tingey SV, Shirley NJ, Taylor J, Hayes K, Beatty M, Bacic A, Burton RA and Fincher GB. (2014) Spatial gradients in cell wall composition and transcriptional profiles along elongating maize internodes. BMC Plant Biology 14: 27.
Zhao X, Ouyang K, Gan S, Zeng W, Song L, Zhao S, Li J, Doblin MS, Bacic A, Chen X-Y, Marchant A, Deng X and Wu A-M (2014) Biochemical and molecular changes associated with heteroxylan biosynthesis in Neolamarckia cadamba (Rubiaceae) during xylogenesis. Frontiers Plant Science 5:602. doi:10.3389/fpls.2014.00602.
Ashton L,Pudney PDA, Blanch EW, Yakubov GE. (2013) Understanding glycoprotein behaviours using Raman and Raman optical activity spectroscopies: Characterising the entanglement induced conformational changes in oligosaccharide chains of mucin. Advances in Colloid and Interface Science, DOI: 10.1016/j.cis.2013.06.005.
Boehm MW, Baier SK, Stokes JR. (2013) Capturing changes in structure and rheology of an oily brittle snack food during in vitro oral processing. International Food Journal, 54 (1), 423-431.
Burton RA, Fincher GB. (2014) Plant Cell Wall Engineering: Applications in Biofuel Production and Improved Human Health. Current Opinion in Biotechnology, 26, April 2014, Pages 79-84 http://dx.doi.org/10.1016/j.bbr.2011.03.031 9.0 3
Byrt CS, Betts NS, Farrohki N and Burton RA. (2013) Deconstructing plant biomass: cell wall structure and novel manipulation strategies. In: BP Singh , ed. Biofuel Crops: Production, Physiology and Genetics. Wallingford: CABI. Ch. 7.
Comino P, Collins HM, Lahnstein J and Gidley MJ. (2013) Separation and Purification of Soluble Polymers and Cell Wall Fractions from Wheat, Rye and Hull less Barley Endosperm Flours for Structure-Nutrition Studies. Journal of Agricultural and Food Chemistry, 61, 12111−12122.
Dawei L, Ford K, Roessner U, Natera S, Cassin AM, Patterson J, Bacic A. (2013) Rice Suspension Cultured Cells are Evaluated as a Model System to Study Salt Responsive Networks in Plants using a Combined Proteomic and Metabolomic Profiling approach. Proteomics 13 (12-13) 2046-2062 Special issue ‘Plant proteomics in crop improvement'.
Dhital S, Lin AHM, Hamaker BR, Gidley MJ, Muniandy, A. (2013) Mammalian mucosal α-glucosidases coordinate with α-amylase in the initial starch hydrolysis stage to have a role in starch digestion beyond glucogenesis. PloS One 8 (4), e62546.
Dhital S, Shelat K, Shrestha AK and Gidley MJ. (2013) Heterogeneity in maize starch granule internal architecture deduced from diffusion of fluorescent dextran probes. Carbohydrate Polymers 93:365–373.
Eini O, Yang N, Pyvovarenko T, Pillman K, Bazanova N, Tikhomirov N, Eliby S, Shirley N, Sivasankar S, Tingey S, Langridge P, Hrmova M, Lopato S (2013) Complex regulation by Apetala2 domain-containing transcription factors revealed through analysis of the stress-responsive TdCor410b promoter from durum wheat. PLoS ONE 8, e58713.
Fredericks CH, Fanning KJ, Gidley MJ, Netzel G, Zabaras D, Herringtone M and Netzel M. (2013) High-anthocyanin strawberries through cultivar selection. Journal of the Science of Food Agriculture, 93: 846–852.
Gibbins HL, Proctor GB, Yakubov GE, Wilson S, Carpenter GH. (2013) Concentration of salivary protective proteins within the bound oral mucosal pellicle. Oral Deseases, DOI: 10.1111/odi.12194.
Gidley MJ (2013) Hydrocolloids in the digestive tract and related health implications, Current Opinion in Colloid & Interface Science 18, 371–378.
Hasjim J, Li E and Dhital S. (2013) Effects of grain milling on starch structures and flour/starch properties. Starch/Stärke, 66, 15-27 DOI:10.1002/star.201200224.
Hasjim J, Li E and Dhital S. (2013) Milling of rice grains. Effects of starch/flour structures on gelatinization and pasting properties. Carbohydrate Polymers 92:682–690.
Hill CB, Taylor JD, Edwards J, Mather D, Bacic A, Langridge P, Roessner U. (2013) Whole genome mapping of agronomic and metabolic traits to identify novel quantitative trait loci in bread wheat (Triticum aestivum L.) grown in a water-limited environment. Plant Physiology, 162: 1266-1281.
Johnston S, Prakash R, Chen NJ, Kumagai MH, Turano HM, Cooney JM, Atkinson RG, Paull RE, Cheetamun R, Bacic A, Brummell DA and Schroeder R. (2013) An enzyme activity capable of endotransglycosylation of heteroxylan polysaccharides is present in plant primary cell walls.Planta, 237: 173-187.
Lampugnani E, Moller I, Cassin A, Jones DF, Koh PL, Ratnayake S, Beahan CT, Wilson SM, Bacic A, Newbigin E. (2013) In vitro grown pollen tubes of Nicotiana alata actively synthesise a fucosylated xyloglucan. PLoS ONE, 8 (10): e77140. doi:10.1371/journal.pone.0077140.
Liu W, Maurer HP, Reif JC, Melchinger AE, Utz HF, Tucker MR, Ranc N, Della Porta G and Würschum T. (2013) Optimum design of family structure and allocation of resources in association mapping with lines from multiple crosses. Heredity 110:71-79.
Milne RJ, Byrt CS, Patrick JW and Grof CPL (2013) Are sucrose transporter expression profiles linked with patterns of biomass partitioning in Sorghum phenotypes? Frontiers in Plant Science 4:223. DOI: 10.3389/fpls.2013.00223.
Moore KL, Chen Y, van de Meene AML, Hughes L, Liu W, Geraki T, Mosselmans F, McGrath SP, Grovenor C and Zhao, F-J (2014) Combined NanoSIMS and synchrotron X-ray fluorescence reveal distinct cellular and subcellular distribution patterns of trace elements in rice tissues. New Phytologist 201: 104-115. DOI: 10.1111/nph.12497.
Okada T, Hu Y, Tucker MR, Taylor JM, Johnson SD, Spriggs A, Tsuchiya T, Oelkers K, Rodrigues JCM, Koltunow AMG (2013) Enlarging cells initiating apomixis in Hieracium praealtum transition to an embryo sac program prior to entering mitosis. Plant Physiology. 163 (1):216-31. DOI:10.1104/pp.113.219485.
Padayachee A, Netzel G, Netzel M, Day L, Mikkelsen D and Gidley MJ. (2013) Lack of release of bound anthocyanins and phenolic acids from carrot plant cell walls and model composites during simulated gastric and small intestinal digestion. Food Function, 4 906-916.
Selway N, Stokes JR. (2013) Insights into the dynamics of oral lubrication and mouthfeel using soft tribology: differentiating semi-fluid foods with similar rheology. International Food Journal, 54 (1) 423-431.
Shelden MC, Roessner U, Sharp RE, Tester M and Bacic A. (2012) Genetic variation in the root growth response of barley cultivars to salinity stress. Functional Plant Biology dx.doi.org/10.1071/FP12290.
Stokes JR, Boehme MW, Baier S. (2013) Oral processing, Texture and Mouthfeel: from rheology to tribology and beyond. Current Opinion in Colloid & Interface Science 18 349–359.
Trafford K, Haleux P, Henderson M, Parker M, Shirley NJ, Tucker MR, Fincher GB, Burton RA. (2013) Grain development in Brachypodium and other grasses: possible interactions between cell expansion, starch deposition, and cell-wall synthesis. Journal of Experimental Botany, DOI:10.1093/jxb/ert292.
Tucker MR,and Koltunow AMG. (2013) Traffic monitors at the cell periphery: the role of cell walls during early female reproductive cell differentiation in plants. Current Opinion in Plant Biology, DOI 10.1016/j.pbi.2013.11.015.
Van Sluyter S, Warnock N, Schmidt S, Anderson P, Van Kan JAL, Bacic A, Waters E (2013) An aspartic acid protease from Botrytis cinerea removes haze forming proteins during white winemaking. Journal of Agricultural and Food Chemistry, 61 (40), pp 9705–9711 DOI: 10.1021/jf402762k.
Wijetunge CD, Li Z, Saeed I, Bowne J, Hsu AL, Roessner U, Bacic A, Halgamuge SK (2013) Exploratory analysis of high-throughput metabolomics data. Metabolomics 9:1311–1320 DOI 10.1007/s11306-013-0545-6.
Würschum T, Tucker MR and Maurer HP. (2013) Stress treatments influence efficiency of microspore embryogenesis and green plant regeneration in hexaploid triticale (x Tritosecale Wittmack L.) In Vitro Cellular and Developmental Biology - Plant, DOI: 10.1007/s11627-013-9539-3.
Zhang B, Dhital S, Gidley MJ. (2013) Synergistic and antagonistic effects of alpha-amylase and amyloglucosidase on starch digestion. Biomacromolecules, 14, 1945-1954.
Mayer KFX, Waugh R, Langridge P, Close TJ, Wise RP, Graner A, Matsumoto T, Sato K, Schulman A, Muehlbauer GJ, Ariyadasa R, Schulte D, Poursarebani N, Zhou R, Steuernagel B, Mascher M, Scholz U, Shi B,Madishetty K, Svensson JT, Bhat P, Moscou M, Resnik J, Hedley P, Liu H, Morris J, Frenkel Z, Korol A, Bergès H, Taudien S, Felder M, Groth M, Platzer M, Himmelbach A, Lonardi1 S, Duma D, Alpert M, Cordero F, Beccuti M, Ciardo G, Ma1 Y, Wanamaker S, Cattonaro F, Vendramin V, Scalabrin S, Radovic S, Wing R, Morgante M, Nussbaumer T, Gundlach H, Martis M, Ariyadasa R, Poland J, Spannagl M, Pfeifer M, Gundlach H, Gundlach H, Moisy C, Tanskanen J, Scalabrin1 S, Zuccolo1 A, Vendramin V, Russell J, Druka A, Marshall D, Bayer M, Swarbreck D, Sampath D, Ayling S, Febrer M, Caccamo M, Tanaka T, Schmutzer T, Bayer M, Brown JWS, Fincher GB and Stein N. (2012) A physical, genetic and functional sequence assembly of the barley genome. Nature 491: 711–716.
Munns R, James RA, Xu B, Athman A, Conn SJ, Jordans C, Byrt CS, Hare RA, Tyerman SD, Tester M, Plett D and Gilliham M. (2012) Wheat grain yield on saline soils is improved by an ancestral Na+ transporter gene. Nature Biotechnology, 30: 360–366.
Gornik SG, Ford KL, Mulhern TD, Bacic A, McFadden GI and Waller R. (2012) Loss of nucleosomal DNA condensation coincides with appearances of a novel nuclear protein in dinoflagellates. Current Biology 22: 1–10.
Pettolino FA, Walsh C, Fincher GB and Bacic A. (2012) Determining the polysaccharide composition of plant cell walls. Nature Protocols 7: 1590–1607.
Wilson SM and Bacic A. (2012) Preparation of plant cells for transmission electron microscopy to optimise immunogold labelling of carbohydrate and protein epitopes. Nature Protocols 9: 1716–1727.
Wilson SM, Burton RA, Collins HM, Doblin MS, Pettolino FA, Shirley N, Fincher FB and Bacic A. (2012) Pattern of deposition of cell wall polysaccharides and transcript abundance of related cell wall synthesis genes during differentiation in barley (Hordeum vulgare) endosperm. Plant Physiology 159:655–670.
Tucker MR, Okada T, Hu Y, Scholefield A, Taylor JM and Koltunow AM. (2012) Somatic small RNA pathways promote the mitotic events of megagametogenesis during female reproductive development in Arabidopsis. Development 139:1399–1404.
Lee JD, Dekkers BJW, Steinbrecher T, Walsh CT, Bacic A, Bentsink L, Leubner-Metzger G and Knox JP. (2012) Distinct cell wall architecture in seed endosperm in representatives of the Brassicaceae and Solanaceae. Plant Physiology 160: 1551–1566.
Tucker MR, Okada T, Johnson SD, Takaiwa F and Koltunow AM. (2012) Sporophytic ovule tissues modulate the initiation and progression of apomixis in Hieracium. Journal of Experimental Botany 63:3229–3241.
Alheit KV, Maurer HP, Reif JC, Tucker MR, Hahn V, Weissmann EA andWuerschum T. (2012) Genome-wide evaluation of genetic diversity and linkage disequilibrium in winter and spring triticale (×Triticosecale Wittmack). BMC Genomics 13:235http:www.biomedcentral.com/1471-2164/13/235.
Padayachee A, Netzel G, NetzelM,Day L, Zabaras D, Mikkelsen D and Gidley MJ. (2012) Binding of polyphenols to plant cell wall analogues – Part 1: Anthocyanins. Food Chemistry 134:155–161.
Padayachee A, Netzel G, NetzelM,Day L, Zabaras D, Mikkelsen D and Gidley MJ. (2012) Binding of polyphenols to plant cell wall analogues – Part 2: Phenolic acids. Food Chemistry 135:2287–2292.
Gunness P, Flanagan BM, Shelat K, Gilbert RG and Gidley MJ.(2012) Kinetic analysis of bile salt passage across a dialysis membrane in the presence of cereal soluble dietary fibre polymers. Food Chemistry 134:2007–2013.
Buchanan M, Burton RA, Dhugga KS, Rafalski JA, Tingey SV, Shirley NJ and Fincher GB. (2012) Endo-(1,4)-ßglucanase gene families in the grasses: temporal and spatial co-transcription of orthologous genes. BMC Plant Biology 12:235 doi:10.1186/1471-2229-12-235.
Würschum T, Tucker MR, Reif JC and Maurer HP. (2012) Improved efficiency of doubled haploid generation in hexaploid triticale by in vitro chromosome doubling. BMC Plant Biology 12:109 http://www.biomedcentral.com/1471- 2229/12/109.
Zhao Y, Chen L, Yakubov G, Aminiafshar T, Han L and Lian G (2012) Experimental and theoretical studies on the binding of epigallocatechingallate to purified porcine gastric mucin. Journal of Physical Chemistry 116:13010–13016.
Shrestha AK, Blazek J, Flanagan BM, Dhital S, Larroque O, Morell MK, Gilbert EP and Gidley MJ. (2012) Molecular, mesoscopic and microscopic structure evolution during amylase digestion of maize starch granules. Carbohydrate Polymers 90:23–33.
Zhang B, Dhital S, Haque E and Gidley M.J. (2012) Preparation and characterization of gelatinised granular starches from aqueous ethanol treatments. Carbohydrate Polymers 90:1587–1594.
Mavroudis NE, Gidley MJ and Sjöholm I. (2012) Osmotic processing: effects of osmotic medium composition on the kinetics and texture of apple tissue. Food Research International 48:839–847.
O'Callaghan S, De Souza DP, Isaac A, Wang Q, Hodkinson L, Olshansky M, Erwin T, Appelbe B, Tull DJ, Roessner U, Bacic A, McConville MJ and Likić VA. (2012) PyMS: a Python toolkit for processing of gas chromatography—mass spectrometry (GC-MS) data. Application and comparative study of selected tools. BMC Bioinformatics 13:115doi:10.1186/1471- 2105-13-115.
Bindon KA, Bacic A and Kennedy JA. (2012) Tissuespecific and developmental modifications of grape cell walls influence the adsorption of proanthocyanidins. Journal of Agricultural and Food Chemistry 60:9249–9260.
Day L, Gomez J, Oiseth SK, Gidley MJ and Williams BA. (2012) Faster fermentation of cooked carrot cell clusters compared to cell wall fragments in vitro by porcine feces. Journal of Agricultural and Food Chemistry 60: 3282–3290.
Al-Rabadi GJ, Torley PJ, Williams BA, Bryden WL and Gidley MJ. (2012) Particle size heterogeneity in milled barley and sorghum grains: effects on physico-chemical properties and starch digestibility. Journal of Cereal Science 56:396–403.
Ling NXY, Lee J, Ellis M, Liao ML, Mau SL, Guest D, Janssen PH, Kovac P, Bacic A and Pettolino FA. (2012) An exo-ß-1,3- D-galactanase from Streptomyces sp. provides insights into type II arabinogalactan structure. Carbohydrate Research 352:70–81.
Hill CB, Jha D, Bacic A, Tester M and Roessner U. (2012) Characterization of ion contents and metabolomic responses to salt stress of different Arabidopsis thaliana AtHKT1;1 genotypes and their parental strains. Molecular Plant doi:10.1093/mp/sss125.
Moller IE, Pettolino FA, Hart C, Lampugnani ER, Willats WG and Bacic A. (2012) Glycan profiling of plant cell wall polymers using microarrays. Journal of Visualized Experiments 70:e4238, doi:10.3791/4238 .
Tan L, Showalter AM, Egelund J, Hernandez-Sanchez A, Doblin MS and Bacic A. (2012) Arabinogalactan-proteins and the research challenges for these enigmatic plant cell surface proteoglycans. Frontiers in Plant Physiology 3:1–10.
Burton RA and Fincher GB. (2012) Current challenges in cell wall biology in the cereals and grasses. Frontiers in Plant Science. 3:130. doi: 10.3389/fpls.2012.00130.
"2012 Publications from Centre personnel, notattributed to the ARC Centre"
Harris DM, Corbin K, Wang T, Gutierrez R, Bertolo AL, Petti C, Smilgies DM, Estevez JM, Bonetta D and Urbanowicz BR. (2012) Cellulose microfibril crystallinity is reduced by mutating C-terminal transmembrane region residues CESA1A903V and CESA3T942I of cellulose synthase. Proceedings of the National Academy of Sciences 109:4098–4103.
Laidlaw HKC, Lahnstein J, Burton RA, Fincher GB and Jobling SA. (2012) Analysis of the arabinoxylan arabinofuranohydrolase gene family in barley does not support their involvement in the remodelling of endosperm cell walls during development. Journal of Experimental Botany 63:3031–3045.
Kovalchuck N, Smith J, Bazanova N, Pyvovarenko T, Singh R, Shirley N, Ismagul A, Johnson A, Milligan AS, Hrmova M, Langridge P and Lopato S. (2012) Characterization of the grain-specific lipid transfer protein TdPR61from wheat, and its promoter activity in wheat, barley and rice. Journal of Experimental Botany, 63:2025–2040.
Wang J, Andersson-Gunnerås S, Gaboreanu I, Hertzberg M, Tucker MR, Zheng B, Leśniewska J, Mellerowicz EJ, Laux T, Sandberg G and Jones B. (2011) Reduced expression of the SHORT-ROOT gene increases the rates of growth and development in hybrid Poplar and Arabidopsis. PLoS One 6:e28878. (not included in 2011 Report)
Cotsaftis O, Plett D, Shirley N, Tester M and Hrmova M. (2012) A two-staged model of Na+ exclusion in rice explained by 3D modeling of HKT transporters and alternative splicing. PLoS One 7:e39865.
Haque E, Whittaker AK, Gidley MJ, Deeth HC, Fibrianto K and Bhandari BR. (2012) Kinetics of enthalpy relaxation of milk protein concentrate powder upon ageing and its effect on solubility. Food Chemistry 134:1368–1373.
Huynh B, Mather DE, Schreiber AW, Toubia J, Baumann U, Shoaei Z, Stein N, Stangoulis J, Edwards J, Shirley N, Langridge P and Fleury D. (2012) Clusters of genes encoding fructan biosynthesizing enzymes in wheat and barley. Plant Molecular Biology 80:299–314.
Regina A, Blazek J, Gilbert E, Flanagan BM, Gidley MJ, Cavanagh C, Larroque O, Li Z and Morell MK. (2012) Differential effects on starch structure and functionality of genetically distinct mechanisms of increasing amylose content in barley. Carbohydrate Polymers 89:979–991.
Kohli A, Narciso JO, Miro B and Raorane M. (2012) Root proteases: reinforced links between nitrogen uptake and mobilization and drought tolerance. Physiologia Plantarum 145:165–179.
Hasjim J, Li E. and Dhital S. (2012). Milling of rice grains. The roles of starch structures in the solubility and swelling properties of rice flour. Starch/Stärke 64:631–645.
Shrestha AK, Arcot J, Dhital S and Crennan S. (2012) Effect of biscuit baking conditions on the stability of microencapsulated 5-methyltetrahydrofolic acid and their physical properties. Food and Nutrition Sciences 3:1445– 1452.
Al-Rabadi GJ, Torley PJ, Williams BA, Bryden WL, Gidley MJ (2011) Effect of extrusion temperature and pre-extrusion particle size on starch digestion kinetics in barley and sorghum grain extrudates, Animal Feed Science and Technology, 168:267-279.
Al-Rabadi GJ, Torley PJ, Williams BA, Bryden WL, Gidley MJ (2011) Particle size of milled barley and sorghum and physico-chemical properties of grain following extrusion, J Food Eng, 103:464-472.
Bowne J, Bacic A, Tester M, Roessner U (2011) Abiotic stress and metabolomics. Annual Plant Reviews, Volume 43, Biology of Plant Metabolomics, Ch 3, Robert Hall (ed) WileyBlackwell Publishing, 43:61-86.
Burton RA, Collins HM, Kibble NAJ, Smith JA, Shirley NJ, Jobling SA, Henderson M, Singh RR, Pettolino FA, Wilson SM, Bird AR, Topping DL, Bacic A, Fincher GB (2011) Overexpression of specific HvCsIF cellulose synthase-like genes in transgenic barley increases the levels of cell wall (1,3;1,4)-beta-D-glucans and alters their fine structure, Plant Biotechnology Journal, 9:117-135.
Conn SJ, Gilliham M, Athman A, Schreiber AW, Baumann U, Moller I, Cheng N-H, Stancombe MA, Hirschi KD, Webb AAR, Burton R, Kaiser BN, Tyerman SD and Leigh RA. (2011). Plant Cell. (2011) Cell-Specific Vacuolar Calcium Storage Mediated by CAX1 Regulates Apoplastic Calcium Concentration, Gas Exchange, and Plant Productivity in Arabidopsis. Plant Cell, 23:240-257.
Dhital S, Shrestha AK, Flanagan BN, Hasjim J, Gidley MJ (2011) Cryo-milling of starch granules leads to differential effects on molecular size and conformation, Carbohydrate Polymers, 84:1133-1140.
Dhital S, Shrestha AK, Hasjim J, Gidley MJ (2011) Physicochemical and Structural Properties of Maize and Potato Starches as a Function of Granule Size, Journal of Agricultural and Food Chemistry, 59:10151-10161.
Egelund J, Ellis M, Doblin MS, Qu Y, Bacic A (2011) Genes and Enzymes of the GT31 Family: Towards Unravelling the Function(s) of the Plant Glycosyltransferase Family Members, Annual Plant Reviews series “Plant polysaccharides: biosynthesis and bioengineering”, 41:213-234.
Drew DP, Hrmova M, Lunde C, Jacobs A, Tester M and Fincher GB (2011) Structural and functional analyses of PpENA1 provide insights into cation binding by type IID P-type ATPases in lower plants and fungi, Biochim Biophys Acta - Biomembranes, 1808:1483-92.
Gould SB, Kraft LGK, van Dooren G, Goodman CD, Ford K, Cassin A, Bacic A, McFadden GI, Waller RF (2011) Ciliate pellicular proteome identifies novel protein families with characteristic repeat motifs that are common to Alveolates. , Molecular Biology & Evolution , 28:1319-1331.
Huson MF, Strounina EV, Kealley CS, Rout MK, Church JS, Appelqvist IAM, Gidley MJ, Gilbert EP (2011) Effects of Thermal Denaturation on the Solid-State Structure and Molecular Mobility of Glycinin, Biomacromolecules, 12:2092- 2102.
Jacobs A., Ford K., Kretschmer J., and Tester M. (2011) Rice plants expressing the moss sodium pumping ATPase PpENA1 maintain greater biomass production under salt stress, Plant Biotechnology Journal, 9:838-847.
Moller IE, De Fine Licht HH, Harholt J, Willats WGT and Boomsma JJ. (2011) The dynamics of plant cell-wall polysaccharide decomposition in leaf-cutting ant fungus gardens. , PLoS ONE, 6(3):e1750.
Pudney PD, Gambelli L, Gidley MJ (2011) Confocal Raman Microspectroscopic Study of the Molecular Status of Carotenoids in Tomato Fruits and Foods, Applied Spectroscopy, 65:127-134.
Prabasari I, Pettolino P, Liao M-L, Bacic A (2011) Pectic polysaccharides from mature orange (Citrus sinensis) fruit albedo cell walls: Sequential extraction and chemical characterization., Carbohydrate Polymers , 84:484-494.
Sabboh-Jourdan H, Valla F, Eprilati I, Gidley MJ (2011) Organic acid bioavailability from banana and sweet potato using an in vitro digestion and Caco-2 cell model, European Journal of Nutrition, 50:31-40.
Shelat KJ, Vilaplana F, Nicholson TM, Gidley MJ, Gilbert RG (2011) Diffusion and rheology characteristics of barley mixed linkage -glucan and possible implications for digestion, Carbohydrate polymers, 86:1732-1738.
Waramboi JG, Dennien S, Gidley MJ, Sopade PA (2011) Characterisation of sweetpotato from Papua New Guinea and Australia: Physicochemical, pasting and gelatinisation properties, Food chemistry, 126:1759-1770.
Williams BA, Mikkelsen D, le Paih L, Gidley MJ (2011) In vitro fermentation kinetics and end-products of cereal arabinoxylans and (1,3;1,4)-beta-glucans by porcine faeces, Journal of Cereal Science, 53:53-58.